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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942286.1_cds_XP_016485813.1_76704
CDS Infomation

[gene=LOC107806202] [db_xref=GeneID:107806202] [protein=transcription factor TGA2-like isoform X4] [protein_id=XP_016485813.1] [location=join(34260..34399,34617..34711,35072..35154,35678..35932,36638..36682,36825..36884,36967..37044,37191..37239,38426..38700,40279..40500,41360..41380)] [gbkey=CDS]
Sequence

ATGGAGAGTCAAAGAATAGGAGAGAGTGGTAGCTTGTCAGCTGAATCAGGACCTTCACAC
CACCATCACAATATGTCTTATGCACTTTTTCGTGGCCTAAATCCTCCTAATACAAGTTTC
ATGTATCATTCCTCTCCAAATAATCAAGAACCGCCAGCTTTTGATTTTGGGGAGTTAGAA
GAAGCTATTGTGTTACAAGGAGTTAAGATGAGCAATGATGAAGCAGCTAAAGCATCTTTA
TATGCAACTACAAACAGACCTGCTGCAACTCTGGAGATGTTCCCTTCTTGGCCTACGAGA
TTCCATCACACCCCAAGGGGAAGCTCAAAATCAGGAGGAGAAGAGAGTAGTAATTCAGGT
TCAGCACTAAACACTTATTCAAGCAGAGGTGAACCTCATTTGGAACCAGAATCTCCTATC
AGTGGAAAACCATCTTCAGATTACCAGTCCCTTGAACAGAATCAGCAGCAGCAACTTCAA
CCACCACAACAACAACTTCAAGAAATGGCAAGTGATAGTCCAAGAACAGGAGTGTCACAC
AGTGAACCAGCTTCAAAATCCAACTATGAAAAGAGAAAGGGTGTTGGTTCAACCTCAGAT
AGGGTGGTTGATGCTAAGACTTTGAGACGTTTAGCTCAAAATAGAGAAGCAGCAAGGAAA
AGCAGACTAAGAAAAAAGGCTTATGTACAACAACTAGAAACAAGTAGGATAAGACTTGCT
CAGCTAGAACAAGAACTTCAGAGGGCTAGATCTCAGGGGCTTTTCATGGGAGGTGCTGCT
GCTGCAGGTGCTAATATCAGCTCTGCAGGTGCTGCAATGTTTGATATGGAATATTCAAGA
TGGTTAGATGACGATCAAAGGCACATTTCTGAGCTTCGAACTGCATTGCAAGCACATCTA
GGAGATGGTGATCTTAGAATAATTGTAGATGGATATATTGCTCATTACGATGAAATTTTC
CAACTCAAAGGAGTTGCTGCTAAATCTGATGTATTTCATCTCATTACTGGAATGTGGACT
ACCCCCGCTGAACGTTGCTTCCTTTGGATGGGCGGTTTTAGGCCCTCGGAGCTAATCAAG
ATGTTGATAGCACAATTGGACCCGTTAACGCAGCAGCAAGTTGTTGGAATTTACAGTCTG
CAGCAATCATCCCAACAGGCAGAAGAAGCACTTTCACAGGGTTTGGAACAATTACAACAA
TCTCTAATTGAAACTGTTGCCAATGGTTCTCTCAATGATGGTATGCATCATATGGCTGTT
GCCCTAGGCAAGCTTGCCAATCTCGAAGGCTTCGTTCGCCAGGACTACCTTTTTACCTTC
TAG

Peptide Sequence

PEP ID

XP_016485813.1
PEP Infomation

PREDICTED: transcription factor TGA2-like isoform X4 [Nicotiana tabacum]
Sequence

MESQRIGESGSLSAESGPSHHHHNMSYALFRGLNPPNTSFMYHSSPNNQEPPAFDFGELE
EAIVLQGVKMSNDEAAKASLYATTNRPAATLEMFPSWPTRFHHTPRGSSKSGGEESSNSG
SALNTYSSRGEPHLEPESPISGKPSSDYQSLEQNQQQQLQPPQQQLQEMASDSPRTGVSH
SEPASKSNYEKRKGVGSTSDRVVDAKTLRRLAQNREAARKSRLRKKAYVQQLETSRIRLA
QLEQELQRARSQGLFMGGAAAAGANISSAGAAMFDMEYSRWLDDDQRHISELRTALQAHL
GDGDLRIIVDGYIAHYDEIFQLKGVAAKSDVFHLITGMWTTPAERCFLWMGGFRPSELIK
MLIAQLDPLTQQQVVGIYSLQQSSQQAEEALSQGLEQLQQSLIETVANGSLNDGMHHMAV
ALGKLANLEGFVRQDYLFTF

Transcript Sequence

Gene sequence data has not been registered.